Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq274 73.4 5e-11 seq173 73.4 5e-11 seq132 73.4 5e-11 >seq274 Length=879 Score = 73.4 bits (80), Expect = 5e-11 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||||||||||||| | | |||||||| |||||||| | ||| | Sbjct 305 TGGCACACCTTATCCCGAAGTTACGGTGTAAATTTGCCGAGTTCCTTAATGATTGTTAGC 246 Query 200 CCGAACGCCTTAGTATTCTCTAC 222 | |||||||| |||| |||||| Sbjct 245 TCAAACGCCTTCGTATACTCTAC 223 >seq173 Length=2604 Score = 73.4 bits (80), Expect = 5e-11 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||||||||||||| | | |||||||| |||||||| | ||| | Sbjct 1373 TGGCACACCTTATCCCGAAGTTACGGTGTAAATTTGCCGAGTTCCTTAATGATTGTTAGC 1314 Query 200 CCGAACGCCTTAGTATTCTCTAC 222 | |||||||| |||| |||||| Sbjct 1313 TCAAACGCCTTCGTATACTCTAC 1291 >seq132 Length=5117 Score = 73.4 bits (80), Expect = 5e-11 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||||||||||||| | | |||||||| |||||||| | ||| | Sbjct 3478 TGGCACACCTTATCCCGAAGTTACGGTGTAAATTTGCCGAGTTCCTTAATGATTGTTAGC 3537 Query 200 CCGAACGCCTTAGTATTCTCTAC 222 | |||||||| |||| |||||| Sbjct 3538 TCAAACGCCTTCGTATACTCTAC 3560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694396562503