Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq274 73.4 5e-11
seq173 73.4 5e-11
seq132 73.4 5e-11
>seq274
Length=879
Score = 73.4 bits (80), Expect = 5e-11
Identities = 66/83 (80%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||||| |||| |||||||||||||| | | |||||||| |||||||| | ||| |
Sbjct 305 TGGCACACCTTATCCCGAAGTTACGGTGTAAATTTGCCGAGTTCCTTAATGATTGTTAGC 246
Query 200 CCGAACGCCTTAGTATTCTCTAC 222
| |||||||| |||| ||||||
Sbjct 245 TCAAACGCCTTCGTATACTCTAC 223
>seq173
Length=2604
Score = 73.4 bits (80), Expect = 5e-11
Identities = 66/83 (80%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||||| |||| |||||||||||||| | | |||||||| |||||||| | ||| |
Sbjct 1373 TGGCACACCTTATCCCGAAGTTACGGTGTAAATTTGCCGAGTTCCTTAATGATTGTTAGC 1314
Query 200 CCGAACGCCTTAGTATTCTCTAC 222
| |||||||| |||| ||||||
Sbjct 1313 TCAAACGCCTTCGTATACTCTAC 1291
>seq132
Length=5117
Score = 73.4 bits (80), Expect = 5e-11
Identities = 66/83 (80%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||||| |||| |||||||||||||| | | |||||||| |||||||| | ||| |
Sbjct 3478 TGGCACACCTTATCCCGAAGTTACGGTGTAAATTTGCCGAGTTCCTTAATGATTGTTAGC 3537
Query 200 CCGAACGCCTTAGTATTCTCTAC 222
| |||||||| |||| ||||||
Sbjct 3538 TCAAACGCCTTCGTATACTCTAC 3560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694396562503
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |