Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq173 105 2e-20
seq169 105 2e-20
seq132 105 2e-20
>seq173
Length=2604
Score = 105 bits (116), Expect = 2e-20
Identities = 193/281 (69%), Gaps = 9/281 (3%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 1706 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATTGAGACAGCTGTTGT 1647
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 1646 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 1587
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTT 179
|| | || | || ||||||| || | |||| || |||| | | || ||
Sbjct 1586 CCCTCATCGGTAAGGCCGCCATTGATTGGGGTATCCTTCAAAACCTAGTTTATTTTAGTC 1527
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| |||| ||| |||||| || || ||||||| |||||| | |||| | | |
Sbjct 1526 AACTAAGAAAATCCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATT 1467
Query 240 -TTCGT-GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| | |||||| |||||| |||||| | ||||||||||
Sbjct 1466 ATTCATCTTTTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 1426
>seq169
Length=2770
Score = 105 bits (116), Expect = 2e-20
Identities = 193/281 (69%), Gaps = 9/281 (3%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 2436 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATTGAGACAGCTGTTGT 2377
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 2376 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 2317
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTT 179
|| | || | || ||||||| || | |||| || |||| | | || ||
Sbjct 2316 CCCTCATCGGTAAGGCCGCCATTGATTGGGGTATCCTTCAAAACCTAGTTTATTTTAGTC 2257
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| |||| ||| |||||| || || ||||||| |||||| | |||| | | |
Sbjct 2256 AACTAAGAAAATCCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATT 2197
Query 240 -TTCGT-GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| | |||||| |||||| |||||| | ||||||||||
Sbjct 2196 ATTCATCTTTTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 2156
>seq132
Length=5117
Score = 105 bits (116), Expect = 2e-20
Identities = 193/281 (69%), Gaps = 9/281 (3%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 3145 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATTGAGACAGCTGTTGT 3204
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 3205 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 3264
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTT 179
|| | || | || ||||||| || | |||| || |||| | | || ||
Sbjct 3265 CCCTCATCGGTAAGGCCGCCATTGATTGGGGTATCCTTCAAAACCTAGTTTATTTTAGTC 3324
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| |||| ||| |||||| || || ||||||| |||||| | |||| | | |
Sbjct 3325 AACTAAGAAAATCCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATT 3384
Query 240 -TTCGT-GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| | |||||| |||||| |||||| | ||||||||||
Sbjct 3385 ATTCATCTTTTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 3425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260793557312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |