Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq173 73.4 8e-11 seq169 73.4 8e-11 seq132 73.4 8e-11 >seq173 Length=2604 Score = 73.4 bits (80), Expect = 8e-11 Identities = 102/143 (71%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || ||||||||| ||||||| Sbjct 1698 ATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATTGAGACAGCTGTTGTATCGTTAA 1639 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | || Sbjct 1638 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 1579 Query 129 GTTACGGCCGCCGTTTACTGGGG 151 | || ||||||| || | ||||| Sbjct 1578 GGTAAGGCCGCCATTGATTGGGG 1556 >seq169 Length=2770 Score = 73.4 bits (80), Expect = 8e-11 Identities = 102/143 (71%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || ||||||||| ||||||| Sbjct 2428 ATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATTGAGACAGCTGTTGTATCGTTAA 2369 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | || Sbjct 2368 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 2309 Query 129 GTTACGGCCGCCGTTTACTGGGG 151 | || ||||||| || | ||||| Sbjct 2308 GGTAAGGCCGCCATTGATTGGGG 2286 >seq132 Length=5117 Score = 73.4 bits (80), Expect = 8e-11 Identities = 102/143 (71%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || ||||||||| ||||||| Sbjct 3153 ATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATTGAGACAGCTGTTGTATCGTTAA 3212 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | || Sbjct 3213 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 3272 Query 129 GTTACGGCCGCCGTTTACTGGGG 151 | || ||||||| || | ||||| Sbjct 3273 GGTAAGGCCGCCATTGATTGGGG 3295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062394571136