Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq122 356 4e-96 seq288 109 9e-22 >seq122 Length=8359 Score = 356 bits (394), Expect = 4e-96 Identities = 234/257 (91%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6346 ACTCGTTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 6405 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 6406 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCA 6464 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | ||| || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct 6465 GTCCGCCAAAGCGGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 6524 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 6525 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 6584 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 6585 AGAGCTCTCAATCTGTC 6601 >seq288 Length=815 Score = 109 bits (120), Expect = 9e-22 Identities = 65/68 (96%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || Sbjct 459 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTC 400 Query 251 AATCTGTC 258 |||||||| Sbjct 399 AATCTGTC 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796055591