Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq122 356 4e-96
seq288 109 9e-22
>seq122
Length=8359
Score = 356 bits (394), Expect = 4e-96
Identities = 234/257 (91%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6346 ACTCGTTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 6405
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 6406 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCA 6464
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
| ||| || | |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 6465 GTCCGCCAAAGCGGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 6524
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 6525 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 6584
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 6585 AGAGCTCTCAATCTGTC 6601
>seq288
Length=815
Score = 109 bits (120), Expect = 9e-22
Identities = 65/68 (96%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||
Sbjct 459 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTC 400
Query 251 AATCTGTC 258
||||||||
Sbjct 399 AATCTGTC 392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796796055591
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |