Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq122 91.5 9e-17 seq307 86.0 4e-15 >seq122 Length=8359 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 6152 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 6208 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||| ||| Sbjct 6209 GGCAGGGACGTAAT-CAACGCATGCT 6233 >seq307 Length=737 Score = 86.0 bits (94), Expect = 4e-15 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand=Plus/Minus Query 57 GCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAA 116 |||||| || ||||||||| ||||||||||| |||||||||||||||||||||||| ||| Sbjct 457 GCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAA 401 Query 117 CGCAAGCT 124 |||| ||| Sbjct 400 CGCATGCT 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798558980