Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq122 91.5 9e-17
seq307 86.0 4e-15
>seq122
Length=8359
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 6152 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 6208
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 6209 GGCAGGGACGTAAT-CAACGCATGCT 6233
>seq307
Length=737
Score = 86.0 bits (94), Expect = 4e-15
Identities = 62/68 (91%), Gaps = 3/68 (4%)
Strand=Plus/Minus
Query 57 GCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAA 116
|||||| || ||||||||| ||||||||||| |||||||||||||||||||||||| |||
Sbjct 457 GCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAA 401
Query 117 CGCAAGCT 124
|||| |||
Sbjct 400 CGCATGCT 393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300798558980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |