Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq122 291 8e-77
seq288 109 6e-22
>seq122
Length=8359
Score = 291 bits (322), Expect = 8e-77
Identities = 180/191 (94%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 7103 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 7044
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 7043 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 6985
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| || |||||||||||||| |||||||||||
Sbjct 6984 CCGTAATGATTAATAGGGATAGTCGGGGGCATCTGTATTCAATTGTCAGAGGTGAAATTC 6925
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 6924 TTGGATTTATT 6914
>seq288
Length=815
Score = 109 bits (120), Expect = 6e-22
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 112 TAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAG 171
|||||||||| |||||||| |||| ||||||||||||| || |||||||||||||| ||
Sbjct 1 TAGGACCGCC-GTAATGATTAATAGGGATAGTCGGGGGCATCTGTATTCAATTGTCAGAG 59
Query 172 GTGAAATTCTTGGATTTATT 191
||||||||||||||||||||
Sbjct 60 GTGAAATTCTTGGATTTATT 79
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511997465440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |