Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq199 77.0 8e-12 seq180 77.0 8e-12 seq116 77.0 8e-12 >seq199 Length=1752 Score = 77.0 bits (84), Expect = 8e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322 ||||||| ||||| |||| || |||||||| || ||||||||||||||| |||||||| Sbjct 419 AACTGACGTTGAGGGACGAAGGCTTGGGGAGCGAATAGGATTAGATACCCTAGTAGTCCA 360 Query 323 CGCCGTAAACGATGAAT 339 || | ||| |||||| Sbjct 359 GGCAGAAAATTATGAAT 343 >seq180 Length=2529 Score = 77.0 bits (84), Expect = 8e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322 ||||||| ||||| |||| || |||||||| || ||||||||||||||| |||||||| Sbjct 351 AACTGACGTTGAGGGACGAAGGCTTGGGGAGCGAATAGGATTAGATACCCTAGTAGTCCA 410 Query 323 CGCCGTAAACGATGAAT 339 || | ||| |||||| Sbjct 411 GGCAGAAAATTATGAAT 427 >seq116 Length=10427 Score = 77.0 bits (84), Expect = 8e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322 ||||||| ||||| |||| || |||||||| || ||||||||||||||| |||||||| Sbjct 2430 AACTGACGTTGAGGGACGAAGGCTTGGGGAGCGAATAGGATTAGATACCCTAGTAGTCCA 2371 Query 323 CGCCGTAAACGATGAAT 339 || | ||| |||||| Sbjct 2370 GGCAGAAAATTATGAAT 2354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203193851648