Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq199 77.0 8e-12
seq180 77.0 8e-12
seq116 77.0 8e-12
>seq199
Length=1752
Score = 77.0 bits (84), Expect = 8e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322
||||||| ||||| |||| || |||||||| || ||||||||||||||| ||||||||
Sbjct 419 AACTGACGTTGAGGGACGAAGGCTTGGGGAGCGAATAGGATTAGATACCCTAGTAGTCCA 360
Query 323 CGCCGTAAACGATGAAT 339
|| | ||| ||||||
Sbjct 359 GGCAGAAAATTATGAAT 343
>seq180
Length=2529
Score = 77.0 bits (84), Expect = 8e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322
||||||| ||||| |||| || |||||||| || ||||||||||||||| ||||||||
Sbjct 351 AACTGACGTTGAGGGACGAAGGCTTGGGGAGCGAATAGGATTAGATACCCTAGTAGTCCA 410
Query 323 CGCCGTAAACGATGAAT 339
|| | ||| ||||||
Sbjct 411 GGCAGAAAATTATGAAT 427
>seq116
Length=10427
Score = 77.0 bits (84), Expect = 8e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322
||||||| ||||| |||| || |||||||| || ||||||||||||||| ||||||||
Sbjct 2430 AACTGACGTTGAGGGACGAAGGCTTGGGGAGCGAATAGGATTAGATACCCTAGTAGTCCA 2371
Query 323 CGCCGTAAACGATGAAT 339
|| | ||| ||||||
Sbjct 2370 GGCAGAAAATTATGAAT 2354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203193851648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |