Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq122 499 6e-139
seq307 237 3e-60
>seq122
Length=8359
Score = 499 bits (552), Expect = 6e-139
Identities = 296/309 (96%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||
Sbjct 6510 GAACGAGACCTTAACCTGCTAAATAGCCCGGCCCGCTTTGGCGGACTGCTGGCTTCTTAG 6451
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6450 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 6391
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 6390 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAACGAGTCAATCACCTTGGCCG 6331
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6330 AAAGGTCTGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 6271
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 6270 CTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTG 6211
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 6210 CCCTTTGTA 6202
>seq307
Length=737
Score = 237 bits (262), Expect = 3e-60
Identities = 137/141 (97%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 284 TCACCTTGGCCGAAAGGTCTGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCA 343
Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 344 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTG 403
Query 308 ATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||||
Sbjct 404 ATTACGTCCCTGCCCTTTGTA 424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947195159808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |