Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq122 266 5e-69 >seq122 Length=8359 Score = 266 bits (294), Expect = 5e-69 Identities = 234/282 (83%), Gaps = 11/282 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2592 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2535 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2534 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 2475 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 |||||||| ||| |||||| |||| ||||| | |||||||||| ||| ||||||| | Sbjct 2474 GAACGGGGCGATCCTCTCCAGCACGTCGTACGAGTGTACGAATAGGCCTTTGGCCCCGGA 2415 Query 180 CCTTAGCAGGCCGGCAACGG---GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 || |||||| ||| ||| || | || |||| | | ||| | || ||||| Sbjct 2414 CCCCAGCAGG--GGC-GCGGTCCGCATACC-TAGAAGTGGTGTGCGGT-GGCGCCCGGAT 2360 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| || |||| || || ||||||||||||||||| Sbjct 2359 TGCAATTTGACAGCGCGCTGGAATGAATCCTTTGCAGACGAC 2318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819195944704