Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq122 266 5e-69
>seq122
Length=8359
Score = 266 bits (294), Expect = 5e-69
Identities = 234/282 (83%), Gaps = 11/282 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 2592 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2535
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2534 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 2475
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
|||||||| ||| |||||| |||| ||||| | |||||||||| ||| ||||||| |
Sbjct 2474 GAACGGGGCGATCCTCTCCAGCACGTCGTACGAGTGTACGAATAGGCCTTTGGCCCCGGA 2415
Query 180 CCTTAGCAGGCCGGCAACGG---GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|| |||||| ||| ||| || | || |||| | | ||| | || |||||
Sbjct 2414 CCCCAGCAGG--GGC-GCGGTCCGCATACC-TAGAAGTGGTGTGCGGT-GGCGCCCGGAT 2360
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||| || |||| || || |||||||||||||||||
Sbjct 2359 TGCAATTTGACAGCGCGCTGGAATGAATCCTTTGCAGACGAC 2318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819195944704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |