Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq13 268 7e-67 seq497 172 4e-38 >seq13 Length=329804 Score = 268 bits (296), Expect = 7e-67 Identities = 629/942 (67%), Gaps = 8/942 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || |||| ||| || ||||| ||||| || | ||| || ||||| || ||||| | Sbjct 256466 GGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTGTACTCAATG 256407 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || |||||||| || || || ||| |||||||| | |||| ||| || ||||| || Sbjct 256406 ATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTACGG 256347 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||| || |||||||| | |||| | || | || ||||| |||| ||| | ||| Sbjct 256346 TTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTCTGGGCCTCTAGAATG 256287 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240 || | ||| | | || | || || | | ||| | ||| | || ||||| Sbjct 256286 GCATACCAGATCTTTTGGGCTCTAACGGT-CTCGCGGCCGCGACCCTCACGCTCGTATCT 256228 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||||| || | ||| || || || | || || | |||| || |||| | ||| Sbjct 256227 CTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCACTCATTTGG 256168 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||||| || | ||| || | | || ||||| ||| || ||||| || ||||| Sbjct 256167 GCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATCTGGAATCCA 256108 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 ||||||||||||||| || || || || || || | ||||| || || || | || Sbjct 256107 GAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTTACGGAGATC 256048 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 ||||| | || | || ||||||||||| || || || ||||| || | || || Sbjct 256047 CAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGCACCTGGGCG 255988 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 |||| ||||||||||| || || | || |||||||| || || | ||| || || Sbjct 255987 TTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACGCGGAGCATGGGCAC 255928 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 || || || || |||| ||||| ||| ||| ||| || ||| | ||| ||| Sbjct 255927 CAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTCTGATACGGTG 255868 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTC 66658 |||||||||| || ||||| || |||| ||||| ||||| || | || ||| Sbjct 255867 GGCATTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCACA--CGTCTTCAGTGTG 255810 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | || || |||||| |||| |||| || | |||| |||| || ||| ||| Sbjct 255809 TCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCACGAGGCAAGCTGG 255750 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 | || || || | || ||||||||| || | ||||| || ||||| | | ||| Sbjct 255749 GCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGTACTTGTTGGAC 255690 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 || | ||||||||||| || || ||||||| ||||| ||||| || | ||| Sbjct 255689 ATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAATACCCACAGCAACA 255630 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGA 66897 ||||| | | || || || ||||| | | || ||| | |||| ||| | |||||| Sbjct 255629 CGCATGATCATGTGCTGGGGACGTTC-AGCGACCTTTCCATCGATACGCAGGAGGTAGGA 255571 Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | ||||| ||||| | ||| ||||| ||| |||||||| Sbjct 255570 CCTCTCCAGTGTCTTAAAACCGAAGTATTGGTAGTTGAAATC 255529 >seq497 Length=111328 Score = 172 bits (190), Expect = 4e-38 Identities = 564/860 (66%), Gaps = 30/860 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| ||||| || Sbjct 105322 ATCTGGCAGATGTACAAGAAGGCAGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 105263 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | |||| | | || || || | |||||| Sbjct 105262 TCCAAGGATCTTCACGACTGGAACAAGCGTCTCAATGA-CGACGAGCGCTTTTTCATCTC 105204 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || || || || |||||||| ||||| | | || || Sbjct 105203 CCACGTTCTCGCCTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTTGTCGAGCG 105144 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| |||||||| | | ||||| | || |||||||| |||||||| || Sbjct 105143 TTTCAGTGGTGAGGTGCAGATCCCAGAGGCCAGGTGCTTCTACGGATTCCAGATCATGAT 105084 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||||||||| | ||| | | |||||||| || |||||||| || | Sbjct 105083 GGAGAACATCCACTCGGAAACATACTCTCTCCTCATCGACACCTACATCAGTGAACCCAA 105024 Query 61383 GGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG--- 61438 | | | || | | | ||||| |||||||| | || || || | | | ||| Sbjct 105023 GCAGAG-GACCTACCTCTTCAACGCCATCGACAACATTCCT----TGCATCCGCAAGAAG 104969 Query 61439 -CGGATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACATTTGG-TGAACGATTGC 61495 | || ||||| || | ||||||| | | | ||| || ||||| | || | | || Sbjct 104968 GCTGACTGGGCTTTGAGGTGGATCAGCGACAAGAACAGC-ACATTCGCCTGCAGGCTTAT 104910 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 || | || || | || |||||| | || ||| ||| || |||||| | ||||| ||| Sbjct 104909 TG-CTTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGTTCATTTGCCTCCATCTTCTGGC 104851 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | ||||| ||||| || ||| | ||||| |||||| ||| ||| | || || || || | Sbjct 104850 TCAAGAAGCGTGGCCTCATGGCAGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATG 104791 Query 61616 AGGGCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674 |||||||||| || || | ||| || || || || || | || | | Sbjct 104790 AGGGCATGCACACCGACTTCGCCTGCCTT-CTTTT------CTCTCACCTCAAGCACAAG 104738 Query 61675 TCGGAGGAGCGTGTGGGTGAG--ATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTT 61731 | || | | ||| ||| | |||| ||||| || |||| || ||||| || Sbjct 104737 CCTGACCAAGCTCTGGTCGAGTCCATCATCGTCGAGGCCGTCGCTATTGAGCAGGAGTTC 104678 Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 || |||||||| |||| | | |||| |||||| || |||| ||||| Sbjct 104677 CTTACTGACGCCCTGCCTTGTGCGTTGCTCGGTATGAATGCCAAGCTCATGTGCCAGTAC 104618 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 || || || ||||| |||||||| | ||| | || | | | ||| || | Sbjct 104617 ATCGAGTTCGTTGCAGACCGTCTCCTACTCGCCCTCGGCAACAGCAAGCACTACCATGCC 104558 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | ||||| || || |||||||| | ||||| || | ||||||||| || || || ||| Sbjct 104557 ACTAACCCCTTCGACTTCATGGAGAACATTTCCCTCGCTGGCAAGACCAACTTCTTTGAG 104498 Query 61912 AAACGTGTAGGCGACTATCA 61931 || | || || ||||| || Sbjct 104497 AAGAGAGTCGGTGACTACCA 104478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565524021040