Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq2133 95.1 2e-17
>seq2133
Length=8030
Score = 95.1 bits (104), Expect = 2e-17
Identities = 159/228 (70%), Gaps = 8/228 (4%)
Strand=Plus/Plus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60
||| || ||||||| ||||||| || || | ||||| |||| || | |||| ||||
Sbjct 1321 TTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGTCATCTTGCGCAA 1380
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||| | |||||||||| | | ||||| ||| || | | | |
Sbjct 1381 AGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTCTTCTA----A 1436
Query 121 ACACGTCGTTCACCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| | || | ||| | |||||| |||| ||||| |||||||| | || ||||||
Sbjct 1437 ACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCAATTTGCC 1496
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTG 225
|| |||||||| | ||| | | | |||||| ||||||||||| ||
Sbjct 1497 GAGTTCCTTAATGATTGTTAGCTCAAGCGCCTTCGTATTCTCTACTTG 1544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694379408653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |