Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq2133 95.1 2e-17 >seq2133 Length=8030 Score = 95.1 bits (104), Expect = 2e-17 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60 ||| || ||||||| ||||||| || || | ||||| |||| || | |||| |||| Sbjct 1321 TTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGTCATCTTGCGCAA 1380 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||| | |||||||||| | | ||||| ||| || | | | | Sbjct 1381 AGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTCTTCTA----A 1436 Query 121 ACACGTCGTTCACCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | || | ||| | |||||| |||| ||||| |||||||| | || |||||| Sbjct 1437 ACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCAATTTGCC 1496 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTG 225 || |||||||| | ||| | | | |||||| ||||||||||| || Sbjct 1497 GAGTTCCTTAATGATTGTTAGCTCAAGCGCCTTCGTATTCTCTACTTG 1544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694379408653