Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2803 264 9e-66 seq1977 264 9e-66 seq1237 149 5e-31 >seq2803 Length=29324 Score = 264 bits (292), Expect = 9e-66 Identities = 446/643 (69%), Gaps = 12/643 (2%) Strand=Plus/Plus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 |||| || || ||||| || | |||||| ||||| | || ||||||||||| ||||||| Sbjct 1597 TGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGA 1656 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 | |||||| |||||| || || || |||||||| | |||| || || ||||||| Sbjct 1657 CGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGC 1716 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 | ||||| |||||||||| |||| | || | ||||| || || |||| ||| | || Sbjct 1717 GGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGA 1776 Query 66180 TGGCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTT 66233 | |||| ||| || ||| || | || | || || |||| |||| | Sbjct 1777 TCGCGTACCAGAGCTTCTGAGCACGGACAGTCTCGCGACC-ACGACCCT-CCTTC----T 1830 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 | || || ||||||||| ||||| ||||| | || |||| |||| || |||| Sbjct 1831 CATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACT 1890 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || ||||| || | ||| || | ||| || ||||| ||| || ||||| | Sbjct 1891 CGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGG 1950 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | |||||||| |||||||| || || || || || |||||| | ||||| || || | Sbjct 1951 GAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTAC 2010 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | |||||| || |||| || |||||||| || || |||||||||||||| | | Sbjct 2011 GGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCAC 2070 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || ||| ||||| ||||| |||||||| || |||||| | ||||| | || Sbjct 2071 CGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCA 2130 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || | ||| ||||| |||| || || ||| | ||| | || || || | Sbjct 2131 TAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGA 2190 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 | |||||| |||||||| ||||||||||| ||||| ||||| Sbjct 2191 TGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGAT 2233 Score = 122 bits (134), Expect = 7e-23 Identities = 326/488 (67%), Gaps = 18/488 (4%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | | |||||| |||| ||| | || ||||||||||||||| Sbjct 693 TCGACAGTGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTC 752 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 ||||||||| |||| || ||| |||||||| | | || |||| | | || || Sbjct 753 TTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGA-GGTGATCTTGCCCATCGTGGGGTC 811 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCA 65255 || || ||||| | ||||| ||||||||| |||| |||||| || || |||| Sbjct 812 CTTCATGTGGATATTGAGGGACTGCGATTGATCGATG-AACGCACCACGGTCGGCGGCCA 870 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | || ||| || || | |||||||||||||||||| | ||| | | | ||| Sbjct 871 TCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGA-GCGCCTTGATGTCA 929 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACC--ACGACGTGCAATAATGCGATTACGCA 65372 ||| || | || | ||| | || || ||| ||||| ||||| || || Sbjct 930 TCTGGGATGTTGGGGATCTGCTGAATAGAGCCGTTCGA--GGCAATGATGCGGTTCTTCA 987 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATG 65428 || || ||||||| || | || | || | | || ||| | | |||| Sbjct 988 TCTGATCAGACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACG----GGTTGACA 1043 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || ||||| || |||| || ||||| || |||||||| || || || || || Sbjct 1044 ACCTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAA 1103 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | ||| || ||| ||||| ||| || || ||||| ||||| ||||| || | ||| Sbjct 1104 CACTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAG 1163 Query 65549 GAGTTTCG 65556 ||||| || Sbjct 1164 GAGTTGCG 1171 >seq1977 Length=29324 Score = 264 bits (292), Expect = 9e-66 Identities = 446/643 (69%), Gaps = 12/643 (2%) Strand=Plus/Plus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 |||| || || ||||| || | |||||| ||||| | || ||||||||||| ||||||| Sbjct 1597 TGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGA 1656 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 | |||||| |||||| || || || |||||||| | |||| || || ||||||| Sbjct 1657 CGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGC 1716 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 | ||||| |||||||||| |||| | || | ||||| || || |||| ||| | || Sbjct 1717 GGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGA 1776 Query 66180 TGGCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTT 66233 | |||| ||| || ||| || | || | || || |||| |||| | Sbjct 1777 TCGCGTACCAGAGCTTCTGAGCACGGACAGTCTCGCGACC-ACGACCCT-CCTTC----T 1830 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 | || || ||||||||| ||||| ||||| | || |||| |||| || |||| Sbjct 1831 CATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACT 1890 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || ||||| || | ||| || | ||| || ||||| ||| || ||||| | Sbjct 1891 CGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGG 1950 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | |||||||| |||||||| || || || || || |||||| | ||||| || || | Sbjct 1951 GAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTAC 2010 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | |||||| || |||| || |||||||| || || |||||||||||||| | | Sbjct 2011 GGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCAC 2070 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || ||| ||||| ||||| |||||||| || |||||| | ||||| | || Sbjct 2071 CGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCA 2130 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || | ||| ||||| |||| || || ||| | ||| | || || || | Sbjct 2131 TAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGA 2190 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 | |||||| |||||||| ||||||||||| ||||| ||||| Sbjct 2191 TGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGAT 2233 Score = 122 bits (134), Expect = 7e-23 Identities = 326/488 (67%), Gaps = 18/488 (4%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | | |||||| |||| ||| | || ||||||||||||||| Sbjct 693 TCGACAGTGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTC 752 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 ||||||||| |||| || ||| |||||||| | | || |||| | | || || Sbjct 753 TTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGA-GGTGATCTTGCCCATCGTGGGGTC 811 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCA 65255 || || ||||| | ||||| ||||||||| |||| |||||| || || |||| Sbjct 812 CTTCATGTGGATATTGAGGGACTGCGATTGATCGATG-AACGCACCACGGTCGGCGGCCA 870 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | || ||| || || | |||||||||||||||||| | ||| | | | ||| Sbjct 871 TCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGA-GCGCCTTGATGTCA 929 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACC--ACGACGTGCAATAATGCGATTACGCA 65372 ||| || | || | ||| | || || ||| ||||| ||||| || || Sbjct 930 TCTGGGATGTTGGGGATCTGCTGAATAGAGCCGTTCGA--GGCAATGATGCGGTTCTTCA 987 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATG 65428 || || ||||||| || | || | || | | || ||| | | |||| Sbjct 988 TCTGATCAGACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACG----GGTTGACA 1043 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || ||||| || |||| || ||||| || |||||||| || || || || || Sbjct 1044 ACCTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAA 1103 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | ||| || ||| ||||| ||| || || ||||| ||||| ||||| || | ||| Sbjct 1104 CACTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAG 1163 Query 65549 GAGTTTCG 65556 ||||| || Sbjct 1164 GAGTTGCG 1171 >seq1237 Length=76238 Score = 149 bits (164), Expect = 5e-31 Identities = 297/435 (68%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || || |||| ||||||||| | || ||||| || || || ||| | || || ||| | Sbjct 9276 GCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCATTTTCTGGCTC 9217 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| ||| |||| ||| ||||||| | || || ||||| ||| Sbjct 9216 AAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTCTCGCGATGAG 9157 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTC 61676 ||||||||| || || || |||| ||| | | ||| || ||| | || | Sbjct 9156 GGCATGCATACCGACTTCGCCTGCCTGCTGTTCTCGCAC-ATCAAGTCGAAGC--CCAGC 9100 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 | | | ||| | |||| | ||||| || ||||| |||| || || || Sbjct 9099 CCCGAATC-TGTCGAGAAGATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCAC 9041 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 |||||| | |||||| | || | |||||||| || |||| ||||| || || Sbjct 9040 GGACGCTCTCCCCGTCGCTCTTCTTGGCATGAACGCGACTCTCATGTGCCAGTACATCGA 8981 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || ||||| ||||| ||| |||| | |||| | ||| | ||| || ||| || Sbjct 8980 GTTCGTTGCTGACCGCCTGCTGGTGGCGCTGGGCAACAAGAAGTACTACAACTCGACCAA 8921 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || ||||| | ||||||||||| || |||||||| || Sbjct 8920 CCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCG 8861 Query 61917 TGTAGGCGACTATCA 61931 || || ||||| || Sbjct 8860 CGTTGGTGACTACCA 8846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553168353040