Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq2474 93.3 2e-13
seq2454 93.3 2e-13
seq1932 93.3 2e-13
seq1268 93.3 2e-13
seq1210 93.3 2e-13
seq1028 93.3 2e-13
seq810 93.3 2e-13
seq250 93.3 2e-13
seq218 93.3 2e-13
>seq2474
Length=101135
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 71742 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 71800
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 71801 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 71860
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 71861 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 71919
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 71920 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 71958
>seq2454
Length=62077
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178
>seq1932
Length=87175
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 57782 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 57840
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 57841 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 57900
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 57901 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 57959
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 57960 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 57998
>seq1268
Length=120811
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 91437 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 91495
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 91496 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 91555
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 91556 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 91614
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 91615 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 91653
>seq1210
Length=112369
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178
>seq1028
Length=120830
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 91437 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 91495
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 91496 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 91555
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 91556 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 91614
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 91615 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 91653
>seq810
Length=145500
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178
>seq250
Length=101505
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178
>seq218
Length=110280
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411
|||||| |||||||| | || ||| || || | || || ||||| ||| | | |
Sbjct 80887 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 80945
Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471
|| || | | | |||| ||||||||||||||||| | | | |||||||| |||| ||
Sbjct 80946 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 81005
Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530
|| | || ||| || ||||||||||| || || || | | | | |||||||||
Sbjct 81006 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 81064
Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
|||||||| | | |||||||||||||| || || ||
Sbjct 81065 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 81103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884812476522473
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |