Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2474 93.3 2e-13 seq2454 93.3 2e-13 seq1932 93.3 2e-13 seq1268 93.3 2e-13 seq1210 93.3 2e-13 seq1028 93.3 2e-13 seq810 93.3 2e-13 seq250 93.3 2e-13 seq218 93.3 2e-13 >seq2474 Length=101135 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 71742 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 71800 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 71801 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 71860 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 71861 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 71919 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 71920 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 71958 >seq2454 Length=62077 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178 >seq1932 Length=87175 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 57782 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 57840 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 57841 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 57900 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 57901 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 57959 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 57960 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 57998 >seq1268 Length=120811 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 91437 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 91495 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 91496 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 91555 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 91556 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 91614 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 91615 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 91653 >seq1210 Length=112369 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178 >seq1028 Length=120830 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 91437 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 91495 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 91496 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 91555 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 91556 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 91614 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 91615 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 91653 >seq810 Length=145500 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178 >seq250 Length=101505 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 29394 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 29336 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 29335 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 29276 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 29275 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTAGG-TAATACCAATGGT 29217 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 29216 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 29178 >seq218 Length=110280 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATC 364411 |||||| |||||||| | || ||| || || | || || ||||| ||| | | | Sbjct 80887 TGAAAGGGGTAGCATCA-CCTTCTTGACCACGAAGAGCGCCGACCTTTGAGAGCAAACAC 80945 Query 364412 TCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCA 364471 || || | | | |||| ||||||||||||||||| | | | |||||||| |||| || Sbjct 80946 TCGATCAAATGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCG 81005 Query 364472 GGCACCATGCCGTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGT 364530 || | || ||| || ||||||||||| || || || | | | | ||||||||| Sbjct 81006 GGAGTAAGACCCTCACGAGTGAAGGGCATATCCTCATGGCGGTA-GGTAATACCAATGGT 81064 Query 364531 TCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||||| | | |||||||||||||| || || || Sbjct 81065 ACCCTTTTGACCGTGACGAGAAGCAAACTTATCTCCGAT 81103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884812476522473