Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2883 1047 0.0 >seq2883 Length=13586 Score = 1047 bits (1160), Expect = 0.0 Identities = 638/675 (95%), Gaps = 1/675 (0%) Strand=Plus/Minus Query 10 GGTGGCCT-AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTA 68 ||| |||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5714 GGTTGCCTTAGCCATGTGAATCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTA 5655 Query 69 AATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 5654 AATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTA 5595 Query 129 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTG 188 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 5594 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTG 5535 Query 189 AAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTG 248 ||||||||||||||||| ||||||||| |||||||||||||||||| | | | |||||| Sbjct 5534 AAAGGGAAGCGCTTGCAGCCAGACTTGTCCGCAGTTGCTCAACCGGTCTCCTGACCGGTG 5475 Query 249 CACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGT 308 |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 5474 TACTCTTCTGCGGCCAGGCCAGCATCAGTTCGGGCGGTCGGATAAAGGCCCTGGGAATGT 5415 Query 309 GGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCC 368 || || |||||| |||||||||||| ||||||||||||||| ||||||||||||| | Sbjct 5414 AGCTCCTCTCGGGGAGTGTTATAGCCCAGGGTGGAATGCGGCCAGCCTGGACTGAGGATC 5355 Query 369 GCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCA 428 |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 5354 TCGCTTCGGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAAACACGGACCA 5295 Query 429 AGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 5294 AGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTAATGAAAGTGAA 5235 Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 5234 CGGAGGTGGGAACCCTCACGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 5175 Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5174 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 5115 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 5114 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATT 5055 Query 669 TGGGTATAGGGGCGA 683 ||||||||||||||| Sbjct 5054 TGGGTATAGGGGCGA 5040 Score = 394 bits (436), Expect = 4e-107 Identities = 227/233 (97%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 451 TGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGG 510 |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 13586 TGTTTGGGTGTCAAACCCATGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCTCACGGG 13527 Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13526 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 13467 Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13466 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 13407 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 13406 CTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 13354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079922651300