Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10- 07] 5,380 sequences; 48,332,782 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2602 874 0.0 >seq2602 Length=3881 Score = 874 bits (968), Expect = 0.0 Identities = 496/504 (98%), Gaps = 0/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1413 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1412 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1353 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1352 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 1293 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1292 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 1233 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 1232 CAAGGCCATGCGATTCGTTAAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 1173 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 1172 TTTTTATCTAATAAATACACCGCTTCCGAAGTCGCGGTTTTTAGCATGTATTAGCTCTAG 1113 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1112 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1053 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1052 GCCATTCGCAGTTTCACAGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 993 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 992 AGACAAGCATATGACTACTGGCAG 969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510318740480