Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 264 9e-66
seq4076 149 5e-31
seq3143 86.0 5e-12
>seq1094
Length=88458
Score = 264 bits (292), Expect = 9e-66
Identities = 446/643 (69%), Gaps = 12/643 (2%)
Strand=Plus/Minus
Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059
|||| || || ||||| || | |||||| ||||| | || ||||||||||| |||||||
Sbjct 25640 TGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGA 25581
Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119
| |||||| |||||| || || || |||||||| | |||| || || |||||||
Sbjct 25580 CGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGC 25521
Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179
| ||||| |||||||||| |||| | || | ||||| || || |||| ||| | ||
Sbjct 25520 GGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGA 25461
Query 66180 TGGCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTT 66233
| |||| ||| || ||| || | || | || || |||| |||| |
Sbjct 25460 TCGCGTACCAGAGCTTCTGAGCACGGACAGTCTCGCGACC-ACGACCCT-CCTTC----T 25407
Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293
| || || ||||||||| ||||| ||||| | || |||| |||| || ||||
Sbjct 25406 CATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACT 25347
Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353
|| || ||||| || | ||| || | ||| || ||||| ||| || ||||| |
Sbjct 25346 CGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGG 25287
Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413
| |||||||| |||||||| || || || || || |||||| | ||||| || || |
Sbjct 25286 GAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTAC 25227
Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473
| | |||||| || |||| || |||||||| || || |||||||||||||| | |
Sbjct 25226 GGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCAC 25167
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| || ||| ||||| ||||| |||||||| || |||||| | ||||| | ||
Sbjct 25166 CGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCA 25107
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| || | ||| ||||| |||| || || ||| | ||| | || || || |
Sbjct 25106 TAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGA 25047
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636
| |||||| |||||||| ||||||||||| ||||| |||||
Sbjct 25046 TGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGAT 25004
Score = 118 bits (130), Expect = 8e-22
Identities = 323/486 (66%), Gaps = 14/486 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | | |||||| |||| ||| | || |||||||||||||||
Sbjct 26544 TCGACAGTGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTC 26485
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196
||||||||| |||| || ||| |||||||| | | || |||| | | || ||
Sbjct 26484 TTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGA-GGTGATCTTGCCCATCGTGGGGTC 26426
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCA 65255
|| || ||||| | ||||| ||||||||| |||| |||||| || || ||||
Sbjct 26425 CTTCATGTGGATATTGAGGGACTGCGATTGATCGATG-AACGCACCACGGTCGGCGGCCA 26367
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | || ||| || || | |||||||||||||||||| | ||| | | | |||
Sbjct 26366 TCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGA-GCGCCTTGATGTCA 26308
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
||| || | || | ||| | || || ||||| ||||| || ||||
Sbjct 26307 TCTGGGATGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATC 26248
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430
|| ||||||| || | || | || | | || ||| | | |||| ||
Sbjct 26247 TGATCAGACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACG----GGTTGACAAC 26192
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
||||| || |||| || ||||| || |||||||| || || || || || |
Sbjct 26191 CTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAACA 26132
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
||| || ||| ||||| ||| || || ||||| ||||| ||||| || | ||| ||
Sbjct 26131 CTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGA 26072
Query 65551 GTTTCG 65556
||| ||
Sbjct 26071 GTTGCG 26066
>seq4076
Length=19007
Score = 149 bits (164), Expect = 5e-31
Identities = 297/435 (68%), Gaps = 5/435 (1%)
Strand=Plus/Minus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| || |||| ||||||||| | || ||||| || || || ||| | || || ||| |
Sbjct 10296 GCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCATTTTCTGGCTC 10237
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||| ||| |||| ||| ||||||| | || || ||||| |||
Sbjct 10236 AAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTCTCGCGATGAG 10177
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTC 61676
||||||||| || || || |||| ||| | | ||| || ||| | || |
Sbjct 10176 GGCATGCATACCGACTTCGCCTGCCTGCTGTTCTCGCAC-ATCAAGTCGAAGC--CCAGC 10120
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
| | | ||| | |||| | ||||| || ||||| |||| || || ||
Sbjct 10119 CCCGAATC-TGTTGAGAAGATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCAC 10061
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
|||||| | |||||| | || | |||||||| || |||| ||||| || ||
Sbjct 10060 GGACGCTCTCCCCGTCGCTCTTCTTGGCATGAACGCGACTCTCATGTGCCAGTACATCGA 10001
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|| ||||| ||||| ||| |||| | |||| | ||| | ||| || ||| ||
Sbjct 10000 GTTCGTTGCTGACCGCCTGCTGGTGGCGCTGGGCAACAAGAAGTACTACAACTCGACCAA 9941
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || |||||||| | || ||||| | ||||||||||| || |||||||| ||
Sbjct 9940 CCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCG 9881
Query 61917 TGTAGGCGACTATCA 61931
|| || ||||| ||
Sbjct 9880 CGTTGGTGACTACCA 9866
>seq3143
Length=89464
Score = 86.0 bits (94), Expect = 5e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 9150 GGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATACG 9209
|||||| | ||||| ||||||||||| || ||||| ||| |||| | || |||
Sbjct 39086 GGCCCCGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCTGAGTACGTGGACGCGACGACG 39145
Query 9210 GACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGT-ATGCATCAGATCCAATATGA 9268
||||| | ||| ||||||||||||||| ||||| |||| || | || | | | |
Sbjct 39146 GACTACAGGGGACAAGGTGTGGATCAGCTGGCG-GATGTGATCGACAAGCTTAAGAACAA 39204
Query 9269 GCCGAGTAGTCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATGGT 9328
|||| ||| ||||| || |||| || ||||||||| || || | |||||||
Sbjct 39205 GCCGTACGATCGCCGCATCATCATGAGCGCGTGGAATCCGGCGGACCTGAAGAAGATGGC 39264
Query 9329 ATTGCCGCCATGCCATATG 9347
|||| || ||||| |||
Sbjct 39265 TCTGCCCCCTTGCCACATG 39283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397541931963200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |