Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2759 385 8e-105 seq1528 208 1e-51 >seq2759 Length=13586 Score = 385 bits (426), Expect = 8e-105 Identities = 256/279 (92%), Gaps = 4/279 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2957 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2900 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2899 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2840 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 2839 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAA 2780 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 | |||||||||||| ||||| | ||| |||| ||||| | |||||||| ||||| Sbjct 2779 TCCTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGAATTGC 2721 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||||||||||||||||||||||||||| Sbjct 2720 AATTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 2682 Score = 385 bits (426), Expect = 8e-105 Identities = 256/279 (92%), Gaps = 4/279 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 11271 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 11214 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11213 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 11154 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 11153 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAA 11094 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 | |||||||||||| ||||| | ||| |||| ||||| | |||||||| ||||| Sbjct 11093 TCCTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGAATTGC 11035 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||||||||||||||||||||||||||| Sbjct 11034 AATTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 10996 >seq1528 Length=1688 Score = 208 bits (230), Expect = 1e-51 Identities = 163/190 (86%), Gaps = 5/190 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1657 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1600 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1599 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1540 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | || ||| |||| |||| | ||| ||| | ||||||||| |||| | Sbjct 1539 GAAAGCGGCGAT--ACTCCCGCACGT-TTAGATGGACAAGAATAGGCTCCGGCTTAGTGT 1483 Query 181 CTTAGCAGGC 190 |||||||||| Sbjct 1482 CTTAGCAGGC 1473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819171025664