Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1952 627 3e-177
>seq1952
Length=461
Score = 627 bits (694), Expect = 3e-177
Identities = 380/401 (95%), Gaps = 3/401 (1%)
Strand=Plus/Minus
Query 143 TAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGA 202
|||||| |||| |||| |||||||| |||||||||||||||||| |||||||||||||||
Sbjct 461 TAACGCTAGAAGATGGACGGTGAAGTCCAGTTCCGCTTCATTGAATAAGTAAAAAAACGA 402
Query 203 TAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAG 262
|||||||||||||||||||| |||||||| |||||||| ||||||||||| | | |
Sbjct 401 TAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATTCTACACCCCCTATG 345
Query 263 TCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC 322
|| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 TCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCT 285
Query 323 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 284 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 225
Query 383 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 165
Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 164 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 105
Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||| |||||||||
Sbjct 104 AGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 64
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635126252480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |