Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10- 07] 4,510 sequences; 46,345,754 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1952 627 3e-177 >seq1952 Length=461 Score = 627 bits (694), Expect = 3e-177 Identities = 380/401 (95%), Gaps = 3/401 (1%) Strand=Plus/Minus Query 143 TAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGA 202 |||||| |||| |||| |||||||| |||||||||||||||||| ||||||||||||||| Sbjct 461 TAACGCTAGAAGATGGACGGTGAAGTCCAGTTCCGCTTCATTGAATAAGTAAAAAAACGA 402 Query 203 TAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAG 262 |||||||||||||||||||| |||||||| |||||||| ||||||||||| | | | Sbjct 401 TAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATTCTACACCCCCTATG 345 Query 263 TCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC 322 || |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 344 TCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCT 285 Query 323 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 284 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 225 Query 383 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 224 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 165 Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 164 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 105 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||| ||||||||| Sbjct 104 AGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635126252480