Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10-
07] 4,124 sequences; 47,007,994 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq3741 253 8e-65
seq3249 187 1e-44
>seq3741
Length=300
Score = 253 bits (280), Expect = 8e-65
Identities = 160/173 (92%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 43 TCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATT 102
|||||| |||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 1 TCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTTCTAAAGCTAAATACC 60
Query 103 GGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGA 162
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 61 GGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGA 120
Query 163 GAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
|||||||| ||||||||||||||||||||||||||||| | ||||||||||
Sbjct 121 GAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGACCAGACTTG 173
>seq3249
Length=241
Score = 187 bits (206), Expect = 1e-44
Identities = 170/212 (80%), Gaps = 3/212 (1%)
Strand=Plus/Plus
Query 288 GGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGC 347
||| |||||| ||||||||||| |||| ||| |||||||||||| | ||| |
Sbjct 17 GGAGAAAGGCTTAGGGAATGTGGCTCCCTC--GGGAGTGTTATAGCCCTTTGCATAATAC 74
Query 348 GGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGG 407
|| | | ||||||| ||||||| |||| ||||||||||||||||||| | ||||
Sbjct 75 CTTTCGGCAG-ACTGAGGACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGA 133
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||||||||||| | | | | ||||||||||||||||| |||||
Sbjct 134 CCCGTCTTGAAACACGGACCAAGGAGTCAACCTTATGTGCGAGTGTTTGGGTGTAAAACC 193
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
| |||||||||||| ||||||| ||||| ||
Sbjct 194 CCAGCGCGTAATGAACGTGAACGTAGGTGAGA 225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079911540200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |