Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307955.1_202015-10- 07] 4,124 sequences; 47,007,994 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3741 253 8e-65 seq3249 187 1e-44 >seq3741 Length=300 Score = 253 bits (280), Expect = 8e-65 Identities = 160/173 (92%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 43 TCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATT 102 |||||| |||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct 1 TCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATCTCTTCTAAAGCTAAATACC 60 Query 103 GGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGA 162 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 61 GGCTAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGA 120 Query 163 GAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 |||||||| ||||||||||||||||||||||||||||| | |||||||||| Sbjct 121 GAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCCTATGACCAGACTTG 173 >seq3249 Length=241 Score = 187 bits (206), Expect = 1e-44 Identities = 170/212 (80%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 288 GGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGC 347 ||| |||||| ||||||||||| |||| ||| |||||||||||| | ||| | Sbjct 17 GGAGAAAGGCTTAGGGAATGTGGCTCCCTC--GGGAGTGTTATAGCCCTTTGCATAATAC 74 Query 348 GGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGG 407 || | | ||||||| ||||||| |||| ||||||||||||||||||| | |||| Sbjct 75 CTTTCGGCAG-ACTGAGGACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGA 133 Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||| | | | | ||||||||||||||||| ||||| Sbjct 134 CCCGTCTTGAAACACGGACCAAGGAGTCAACCTTATGTGCGAGTGTTTGGGTGTAAAACC 193 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 | |||||||||||| ||||||| ||||| || Sbjct 194 CCAGCGCGTAATGAACGTGAACGTAGGTGAGA 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079911540200