Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Madurella_20mycetomatis_20[genbank_20GCA_5F001275765.2_202016-03-09] 804 sequences; 36,704,944 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq67 93.3 2e-13 seq373 89.7 2e-12 >seq67 Length=117402 Score = 93.3 bits (102), Expect = 2e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| |||||| |||||||| | ||| | || || || ||||| || | || || |||| Sbjct 56344 CGTTGAGAATTTCCTTGAGGCGGGGGACACCAAGTGTGACGTTTTTAGACGACACACCGG 56403 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 |||||||||| || | || |||| ||| ||| ||||| |||||| ||||| | |||| Sbjct 56404 CAAAGTGGAATGTGTTCAGCGTCATCTGAGTGGCCGGCTCACCGATGGACTGGGCGGCGA 56463 Query 349194 GGATGCCTACCATCTCGCCGGGCG 349217 | | || ||||| || || |||| Sbjct 56464 GCACTCCAACCATTTCTCCAGGCG 56487 >seq373 Length=33999 Score = 89.7 bits (98), Expect = 2e-12 Identities = 126/176 (72%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 448639 GGCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCG 448698 ||||||||||| | | | || |||||||||| || || | || || ||||| | || Sbjct 18228 GGCGCCGTAGGCGATCAGGCAGTCGCGCTCCATCTCTCCGAGGCGCAGGCCGCCATCGCG 18169 Query 448699 CAACTTGCCCTCGGTGGGCTGCCGCGTGAGGA--GCGAGTACGGTCCCCTCTGCCGCGTG 448756 | | ||||||||| |||||||||||||||| || | || |||| | ||||| | Sbjct 18168 CGAGCGGCCCTCGGTCGGCTGCCGCGTGAGGATGGCCNG---GGGCCCCGCGACCGCGAG 18112 Query 448757 TGCATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAA 448812 |||||||| ||| ||| ||||| || | |||| || ||| ||| ||| ||| Sbjct 18111 TGCATCTTGTCCTGTACCATGTGCTTCAGCCGCTGGTAGTAGATGGGTCCGTTGAA 18056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084717200789592