Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04] 1,980 sequences; 42,710,978 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq613 360 3e-97 seq134 91.5 2e-16 >seq613 Length=8294 Score = 360 bits (398), Expect = 3e-97 Identities = 237/258 (92%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3712 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3653 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 3652 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 3594 Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| || ||| | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 3593 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 3535 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 3534 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGA 3475 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 3474 AAGAGCTCTCAATCTGTC 3457 >seq134 Length=30989 Score = 91.5 bits (100), Expect = 2e-16 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 12278 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGA 12330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796784716380