Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20grisea_20[genbank_20GCA_5F001548815.1_202016-02-04]
1,980 sequences; 42,710,978 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq613 226 5e-57
>seq613
Length=8294
Score = 226 bits (250), Expect = 5e-57
Identities = 224/279 (80%), Gaps = 8/279 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 7468 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 7525
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 7526 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 7585
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 7586 GAACGCGGCGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 7643
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| |||||| || ||| || | || ||||||| || | | | | ||| ||||
Sbjct 7644 CTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATTGT 7700
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| ||||||||||||||||||
Sbjct 7701 AATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 7739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819184286720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |