Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734075.1_202014-07-28] 6,787 sequences; 38,048,501 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1152 349 7e-94 seq3441 84.2 4e-14 >seq1152 Length=439 Score = 349 bits (386), Expect = 7e-94 Identities = 219/235 (93%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 94 CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCG 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCG 60 Query 154 CACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAA 213 ||||||||||||||||||| ||||| ||||| | || |||||||| ||| | |||||| Sbjct 61 CACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAA 118 Query 214 TCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 273 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 TCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 178 Query 274 ATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || |||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 179 ATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 233 >seq3441 Length=13963 Score = 84.2 bits (92), Expect = 4e-14 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223 ||||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||| Sbjct 5173 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 5116 Query 224 CTCTGTCGTGCTGGG 238 || |||||||||||| Sbjct 5115 CTGTGTCGTGCTGGG 5101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947135713536