Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734085.1_202014-07-28] 8,396 sequences; 35,759,866 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq887 181 2e-43 seq27 145 1e-32 seq5872 82.4 1e-13 >seq887 Length=316 Score = 181 bits (200), Expect = 2e-43 Identities = 115/122 (94%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 139 GGGCTATTTAGCAGGTTAAGG-TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCC 197 ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| Sbjct 302 GGGCTATTTAGCAGGTTAAGGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCC 243 Query 198 ACCAACTAAGAACGG-CCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 ||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||||| Sbjct 242 ACCAACTAAGAACGGCCCTTGCACCACCACCCATAAAATCAAGAAAGAGCTCTCAATCTG 183 Query 257 TC 258 || Sbjct 182 TC 181 >seq27 Length=2305 Score = 145 bits (160), Expect = 1e-32 Identities = 93/100 (93%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 99 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 40 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATA 101 |||||||||||||||||||||||| |||| | |||| ||| Sbjct 39 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATA 1 >seq5872 Length=4090 Score = 82.4 bits (90), Expect = 1e-13 Identities = 67/80 (84%), Gaps = 6/80 (8%) Strand=Plus/Plus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAACTAAGAACGGCC 214 |||||||||||||| ||||| |||||||| ||||| || | |||||||||||||| Sbjct 1 CTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAACTAAGAACGGCC 60 Query 215 ATGCACCACCACCCATAGAA 234 |||||||||| |||||| || Sbjct 61 ATGCACCACCGCCCATAAAA 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796735191276