Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734085.1_202014-07-28] 8,396 sequences; 35,759,866 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq27 363 3e-98 seq3731 82.4 1e-13 >seq27 Length=2305 Score = 363 bits (402), Expect = 3e-98 Identities = 227/243 (93%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 86 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 60 Query 146 CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGT 205 ||||||||||||||||||||||||||| ||||| ||||| | || |||||||| ||| Sbjct 61 CTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGC 118 Query 206 CTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 265 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 119 CCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 178 Query 266 AACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325 |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 179 AACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTT 238 Query 326 GTA 328 ||| Sbjct 239 GTA 241 >seq3731 Length=15228 Score = 82.4 bits (90), Expect = 1e-13 Identities = 63/74 (85%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 |||||||| ||||| ||||| | || |||||||| ||| | ||||||||||||||||| Sbjct 6828 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6885 Query 225 TCTGTCGTGCTGGG 238 | |||||||||||| Sbjct 6886 TGTGTCGTGCTGGG 6899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947120473088