Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734085.1_202014-07-28]
8,396 sequences; 35,759,866 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq27 363 3e-98
seq3731 82.4 1e-13
>seq27
Length=2305
Score = 363 bits (402), Expect = 3e-98
Identities = 227/243 (93%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 86 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 60
Query 146 CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGT 205
||||||||||||||||||||||||||| ||||| ||||| | || |||||||| |||
Sbjct 61 CTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGC 118
Query 206 CTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 265
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 119 CCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 178
Query 266 AACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325
|||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 179 AACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTT 238
Query 326 GTA 328
|||
Sbjct 239 GTA 241
>seq3731
Length=15228
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6828 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6885
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 6886 TGTGTCGTGCTGGG 6899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947120473088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |