Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734095.1_202014-07-28] 5,680 sequences; 37,556,816 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq11 143 1e-32 seq5232 100 2e-19 >seq11 Length=1474 Score = 143 bits (158), Expect = 1e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || | Sbjct 1182 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 1124 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1123 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1066 >seq5232 Length=28091 Score = 100 bits (110), Expect = 2e-19 Identities = 94/118 (80%), Gaps = 10/118 (8%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA------- 52 ||||||| | |||| | |||| |||||||||||| || ||||||| | || Sbjct 118 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAAAAAAAAAAAAAA 59 Query 53 -CATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109 || || |||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 58 ACACCGTCCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278385175200