Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734095.1_202014-07-28]
5,680 sequences; 37,556,816 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq11 143 1e-32
seq5232 100 2e-19
>seq11
Length=1474
Score = 143 bits (158), Expect = 1e-32
Identities = 104/118 (88%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || |
Sbjct 1182 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 1124
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1123 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1066
>seq5232
Length=28091
Score = 100 bits (110), Expect = 2e-19
Identities = 94/118 (80%), Gaps = 10/118 (8%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA------- 52
||||||| | |||| | |||| |||||||||||| || ||||||| | ||
Sbjct 118 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAAAAAAAAAAAAAA 59
Query 53 -CATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109
|| || |||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 58 ACACCGTCCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278385175200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |