Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734095.1_202014-07-28]
5,680 sequences; 37,556,816 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq91 372 6e-101
seq11 102 2e-19
seq5495 84.2 4e-14
>seq91
Length=517
Score = 372 bits (412), Expect = 6e-101
Identities = 232/248 (94%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 81 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 458
Query 141 ATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGG 200
|||||||||||||||||||||||||||||||| ||||| ||||| | || ||||||||
Sbjct 457 ATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGA 400
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 399 GAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 340
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||
Sbjct 339 TCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGC 280
Query 321 CCTTTGTA 328
||||||||
Sbjct 279 CCTTTGTA 272
>seq11
Length=1474
Score = 102 bits (112), Expect = 2e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 1401 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 1460
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 1461 AGGGACTATCGGCT 1474
>seq5495
Length=13585
Score = 84.2 bits (92), Expect = 4e-14
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223
||||||||| ||||| ||||| | || |||||||| ||| | ||||||||||||||||
Sbjct 5165 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 5108
Query 224 CTCTGTCGTGCTGGG 238
|| ||||||||||||
Sbjct 5107 CTGTGTCGTGCTGGG 5093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947146199040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |