Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734095.1_202014-07-28] 5,680 sequences; 37,556,816 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq36 203 5e-50 >seq36 Length=1613 Score = 203 bits (224), Expect = 5e-50 Identities = 220/280 (79%), Gaps = 9/280 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTG-CGGCTGTCTGACCAGGCAG 59 |||||||||||||||| |||||| ||||||| ||||| ||| |||| ||| ||||| Sbjct 1011 GTACGAGAGGAACCGCTCC-TTCAGA-TAATTGGGTTTTGGCGGTTGTCCGACAGGGCAG 1068 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 ||||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||| Sbjct 1069 TGCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCC 1128 Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 |||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 1129 AGAACGCGACGATAC-CTCCCGCACGTT-TAGACGGATAAGAATAGGCTTCGGCCTCGTA 1186 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 || ||||||| | ||| || | || ||||||| || | | | ||| |||| Sbjct 1187 TCTCAGCAGGC-GATAACCC-CGCCGGGCTCGAAGCGCCCGGTGGGGAT-TCGCGTATTG 1243 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| || |||| ||| |||||||||||||||||| Sbjct 1244 TAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819154923520