Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734095.1_202014-07-28]
5,680 sequences; 37,556,816 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq36 203 5e-50
>seq36
Length=1613
Score = 203 bits (224), Expect = 5e-50
Identities = 220/280 (79%), Gaps = 9/280 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTG-CGGCTGTCTGACCAGGCAG 59
|||||||||||||||| |||||| ||||||| ||||| ||| |||| ||| |||||
Sbjct 1011 GTACGAGAGGAACCGCTCC-TTCAGA-TAATTGGGTTTTGGCGGTTGTCCGACAGGGCAG 1068
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
||||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||
Sbjct 1069 TGCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCC 1128
Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
|||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 1129 AGAACGCGACGATAC-CTCCCGCACGTT-TAGACGGATAAGAATAGGCTTCGGCCTCGTA 1186
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAGCGCGGGGCGCTCAGCTGGCGGATTG 238
|| ||||||| | ||| || | || ||||||| || | | | ||| ||||
Sbjct 1187 TCTCAGCAGGC-GATAACCC-CGCCGGGCTCGAAGCGCCCGGTGGGGAT-TCGCGTATTG 1243
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| ||||||||||||||||||
Sbjct 1244 TAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819154923520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |