Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734105.1_202014-07-28]
7,899 sequences; 35,818,083 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq62 387 3e-105
seq49 102 2e-19
seq890 82.4 1e-13
>seq62
Length=707
Score = 387 bits (428), Expect = 3e-105
Identities = 240/256 (94%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 73 TTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 707 TTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 648
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| | || |
Sbjct 647 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--C 590
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 589 TTGGCCGAGAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCA 530
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||
Sbjct 529 ATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC 470
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 469 GTCCCTGCCCTTTGTA 454
>seq49
Length=345
Score = 102 bits (112), Expect = 2e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 74 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 15
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 14 AGGGACTATCGGCT 1
>seq890
Length=28518
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6828 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6885
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 6886 TGTGTCGTGCTGGG 6899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947125180672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |