Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734155.1_202014-07-28]
8,416 sequences; 36,260,258 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 8e-17
>seq1
Length=1262
Score = 91.5 bits (100), Expect = 8e-17
Identities = 60/65 (92%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 53 CATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTC 112
|| || |||||||||||||||||||||| | |||||||||||||||||||||||||| ||
Sbjct 1262 CACCGTCCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCTTC 1204
Query 113 TTCGA 117
|||||
Sbjct 1203 TTCGA 1199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278378034240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |