Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734155.1_202014-07-28]
8,416 sequences; 36,260,258 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq35 376 5e-102
seq34 102 2e-19
seq7814 82.4 1e-13
>seq35
Length=458
Score = 376 bits (416), Expect = 5e-102
Identities = 237/254 (93%), Gaps = 3/254 (1%)
Strand=Plus/Minus
Query 76 TTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 TTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 399
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195
||||||||||||||||||||||||||||||||||||| ||||| ||||| | | |||||
Sbjct 398 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTT--CCTTG 341
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC-AAT 254
|||| ||| | |||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 340 GCCGAGAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAAAT 281
Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314
||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct 280 TATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGT 221
Query 315 CCCTGCCCTTTGTA 328
||||||||||||||
Sbjct 220 CCCTGCCCTTTGTA 207
>seq34
Length=346
Score = 102 bits (112), Expect = 2e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 273 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 332
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 333 AGGGACTATCGGCT 346
>seq7814
Length=15238
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 8381 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 8324
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 8323 TGTGTCGTGCTGGG 8310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947120283648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |