Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734165.1_202014-07-28] 8,275 sequences; 36,036,965 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4 111 3e-22 seq70 96.9 6e-18 seq3982 93.3 7e-17 >seq4 Length=2333 Score = 111 bits (122), Expect = 3e-22 Identities = 82/93 (88%), Gaps = 6/93 (6%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGG--CCCAGAACATCTAAGGGCATCACA 59 ||||| ||||| |||||||||||||||||| || |||||||||||||||||||||| Sbjct 93 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGTGGGGCCCAGAACATCTAAGGGCATCA-- 36 Query 60 GACCTGT--TATTGCCTCAAACTTCCATTGGCT 90 ||||||| ||||||||||||||||||| |||| Sbjct 35 GACCTGTGTTATTGCCTCAAACTTCCATCGGCT 3 >seq70 Length=254 Score = 96.9 bits (106), Expect = 6e-18 Identities = 68/74 (92%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 187 CAAATCACTCCACCAACTAA-GAACGGCCATGCACCACCACCCATAGAATCAA-GAAAGA 244 ||||||||||||||||| || |||||||||||||| |||||||||| |||||| |||||| Sbjct 1 CAAATCACTCCACCAACCAAAGAACGGCCATGCAC-ACCACCCATAAAATCAAAGAAAGA 59 Query 245 GCTATCAATCTGTC 258 ||| |||||||||| Sbjct 60 GCTCTCAATCTGTC 73 >seq3982 Length=11408 Score = 93.3 bits (102), Expect = 7e-17 Identities = 76/91 (84%), Gaps = 6/91 (7%) Strand=Plus/Plus Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203 ||||| | ||||||||||||||||| ||||| |||||||| ||||| || | ||| Sbjct 10994 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 11053 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234 ||||||||||||||||||||| |||||| || Sbjct 11054 TAAGAACGGCCATGCACCACCGCCCATAAAA 11084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796736125275