Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734165.1_202014-07-28]
8,275 sequences; 36,036,965 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq4 316 4e-84
seq3479 84.2 4e-14
>seq4
Length=2333
Score = 316 bits (350), Expect = 4e-84
Identities = 216/239 (90%), Gaps = 7/239 (3%)
Strand=Plus/Plus
Query 94 CAAGCCGATGGAAGTTTGAGGCAATAACA--GGTCTGTGATGCCCTTAGATGTTCTGGGC 151
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 1 CAAGCCGATGGAAGTTTGAGGCAATAACACAGGTCTG--ATGCCCTTAGATGTTCTGGGC 58
Query 152 CGCAC--GCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGG 209
| ||| |||||||||||||||| ||||| ||||| | | ||||||||| ||| | ||
Sbjct 59 CCCACACGCGCGCTACACTGACACAGCCAGCGAGTCCTTT-CCTTGGCCGAGAGGCCCGG 117
Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 GTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 177
Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 178 AGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 236
>seq3479
Length=12949
Score = 84.2 bits (92), Expect = 4e-14
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223
||||||||| ||||| ||||| | || |||||||| ||| | ||||||||||||||||
Sbjct 6076 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 6019
Query 224 CTCTGTCGTGCTGGG 238
|| ||||||||||||
Sbjct 6018 CTGTGTCGTGCTGGG 6004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947121619200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |