Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734165.1_202014-07-28] 8,275 sequences; 36,036,965 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4 316 4e-84 seq3479 84.2 4e-14 >seq4 Length=2333 Score = 316 bits (350), Expect = 4e-84 Identities = 216/239 (90%), Gaps = 7/239 (3%) Strand=Plus/Plus Query 94 CAAGCCGATGGAAGTTTGAGGCAATAACA--GGTCTGTGATGCCCTTAGATGTTCTGGGC 151 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 1 CAAGCCGATGGAAGTTTGAGGCAATAACACAGGTCTG--ATGCCCTTAGATGTTCTGGGC 58 Query 152 CGCAC--GCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGG 209 | ||| |||||||||||||||| ||||| ||||| | | ||||||||| ||| | || Sbjct 59 CCCACACGCGCGCTACACTGACACAGCCAGCGAGTCCTTT-CCTTGGCCGAGAGGCCCGG 117 Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 GTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 177 Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 178 AGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 236 >seq3479 Length=12949 Score = 84.2 bits (92), Expect = 4e-14 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223 ||||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||| Sbjct 6076 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 6019 Query 224 CTCTGTCGTGCTGGG 238 || |||||||||||| Sbjct 6018 CTGTGTCGTGCTGGG 6004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947121619200