Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734165.1_202014-07-28]
8,275 sequences; 36,036,965 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq24 441 2e-121
seq19 356 8e-96
>seq24
Length=613
Score = 441 bits (488), Expect = 2e-121
Identities = 262/274 (96%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
|||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 TCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAA 60
Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 120
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 180
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
|||||||||||||||||||||||||||||| |||| ||| || |||||||||||||||
Sbjct 181 AGTTACTCCCGCCGTTTACCCGCGCTTGGTCAAATTACTTTGCTGTGACATTCAGAGCAC 240
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
|||||||||||||||||||||||||| | |||||
Sbjct 241 TGGGCAGAAATCACATTGCGTCAACACCGCTTTC 274
>seq19
Length=445
Score = 356 bits (394), Expect = 8e-96
Identities = 257/295 (87%), Gaps = 5/295 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 290 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 231
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 230 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 171
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||| |||| |||||| ||| || || |||| |||||| || ||
Sbjct 170 CGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACG--TAAATCCAGCCCCGCTTAATCGA 113
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 112 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 56
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||
Sbjct 55 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635064687200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |