Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734165.1_202014-07-28]
8,275 sequences; 36,036,965 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq48 150 3e-34
seq20 120 5e-25
>seq48
Length=297
Score = 150 bits (166), Expect = 3e-34
Identities = 107/120 (89%), Gaps = 2/120 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 118 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 61
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 60 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 1
>seq20
Length=903
Score = 120 bits (132), Expect = 5e-25
Identities = 146/191 (76%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCG 148
||||||||||||||||||| |||||| |||||||||| | ||| | |||| |||| |
Sbjct 901 GGCTGAACGCCTCTAAGTCGGAATCCTTGCCAGAACGCGACGATAC-CTCCCGCACGT-T 844
Query 149 TAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC 208
||| |||||| ||||||||||||||| || | || |||||| || ||| || | ||
Sbjct 843 TAGACGGATAAGAATAGGCTTCGGCCTCGTATCTCAGCAGG-CGATAAC-CCCGCCGGGC 786
Query 209 -GGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCT 267
||||||| || | | | | ||| |||| ||||| || |||| ||| |||||||
Sbjct 785 TCGAAGCGCCCGGTGGTGA-TTCGCGTATTGTAATTTTGACACGCGCGGGGTCAAATCCT 727
Query 268 TTGCAGACGAC 278
|||||||||||
Sbjct 726 TTGCAGACGAC 716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819134329600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |