Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28]
8,248 sequences; 36,211,322 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq5 302 8e-80
seq1945 232 1e-58
>seq5
Length=1155
Score = 302 bits (334), Expect = 8e-80
Identities = 180/187 (96%), Gaps = 1/187 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct 970 TACTAAGCTCAATTACCATTGCGACGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1028
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1088
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1089 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1148
Query 181 GAACGCT 187
|||||||
Sbjct 1149 GAACGCT 1155
>seq1945
Length=1031
Score = 232 bits (256), Expect = 1e-58
Identities = 131/133 (98%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1031 AAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTT 972
Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 912
Query 283 GGTTTGTATTCAC 295
|||||||||||||
Sbjct 911 GGTTTGTATTCAC 899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854329529088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |