Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28]
8,248 sequences; 36,211,322 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq8 349 7e-94
seq7 100 5e-19
seq7910 84.2 4e-14
>seq8
Length=1042
Score = 349 bits (386), Expect = 7e-94
Identities = 219/235 (93%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 94 CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCG 983
Query 154 CACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAA 213
||||||||||||||||||| ||||| ||||| | || |||||||| ||| | ||||||
Sbjct 982 CACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAA 925
Query 214 TCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 273
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 TCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 865
Query 274 ATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| |||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 864 ATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 810
>seq7
Length=345
Score = 100 bits (110), Expect = 5e-19
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 273 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 332
Query 80 AGGGACTATCGGC 92
|||||||||||||
Sbjct 333 AGGGACTATCGGC 345
>seq7910
Length=15239
Score = 84.2 bits (92), Expect = 4e-14
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6826 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6883
Query 225 TCTGTCGTGCTGGGG 239
| |||||||||||||
Sbjct 6884 TGTGTCGTGCTGGGG 6898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947121874944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |