Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734185.1_202014-07-28]
8,248 sequences; 36,211,322 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1945 735 0.0
>seq1945
Length=1031
Score = 735 bits (814), Expect = 0.0
Identities = 487/536 (91%), Gaps = 7/536 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 867 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 808
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 807 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 748
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||| |||| |||||| ||| || || |||| |||||| || ||
Sbjct 747 CGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACGT--AAATCCAGCCCCGCTTAATCGA 690
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTG-CGCCGAAACGGCTCCCACTT 245
|||||||||||| ||| | ||||||||||||||| | ||||||| |||||||| |
Sbjct 689 ATAAGTAAAAAAAA-ATAGGAGTAGTGGTATTTCACCGGTCGCCGAA---GCTCCCACCT 634
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 633 ATTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 574
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 514
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 454
Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 453 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTCAAATTAC 394
Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
|| || ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 393 TTTGCTGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635065128704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |