Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734215.1_202014-07-28]
5,947 sequences; 37,593,290 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq11 199 6e-49
seq20 143 4e-32
seq3634 93.3 7e-17
>seq11
Length=320
Score = 199 bits (220), Expect = 6e-49
Identities = 116/120 (97%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 21 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCA 80
Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 81 CCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAAAGAGCTCTCAATCTGTC 140
>seq20
Length=505
Score = 143 bits (158), Expect = 4e-32
Identities = 85/89 (96%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 474
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCT 90
|||||||||||||||||||||||| ||||
Sbjct 475 CCTGTTATTGCCTCAAACTTCCATCGGCT 503
>seq3634
Length=10087
Score = 93.3 bits (102), Expect = 7e-17
Identities = 76/91 (84%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||
Sbjct 487 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 428
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 427 TAAGAACGGCCATGCACCACCGCCCATAAAA 397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796754095107
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |