Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734215.1_202014-07-28]
5,947 sequences; 37,593,290 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq6 713 0.0
>seq6
Length=1263
Score = 713 bits (790), Expect = 0.0
Identities = 462/504 (92%), Gaps = 2/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 533 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 592
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 593 CGCCGTGTCGGCATTGG-TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 651
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||| ||||||| |||| |||||| | ||||||||||||| |||| ||
Sbjct 652 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 711
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| | || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 771
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| ||||||| ||||||||||| |||||||||||||| |||||
Sbjct 772 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 831
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 832 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 891
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 892 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 951
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 952 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 1010
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 1011 AGACAAGCATATGACTACTGGCAG 1034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510310176512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |