Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28]
7,622 sequences; 36,716,275 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq28 376 1e-101
seq27 279 2e-72
>seq28
Length=560
Score = 376 bits (416), Expect = 1e-101
Identities = 308/368 (84%), Gaps = 10/368 (3%)
Strand=Plus/Minus
Query 313 CCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC 372
|| ||||||| ||||||||||||| | | ||| | || || |||| || | ||||||
Sbjct 559 CCTTTCGGGGAGTGTTATAGCCCGTTGCGTAATACC-CCGGCGGGGACCGACGACCGCGC 501
Query 373 TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGA 432
| |||| ||||||||||||||||||| | |||| ||||||||| |||||||||| ||||
Sbjct 500 TTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGGA 441
Query 433 GTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGA 492
||| | ||| ||||||||||||||||| ||||||| ||||||||||||| ||||| |
Sbjct 440 GTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAG-GAACGTA 382
Query 493 GGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
|||| || | || ||| ||||||||||||||||||| |||||| ||||||||||
Sbjct 381 GGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGT 326
Query 553 AAGAGCA-TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611
| ||||| || | |||| ||| |||||||||||||||| | ||||||||| | |||||
Sbjct 325 AGGAGCATTAACGCTTGG--CCCCAAAGATGGTGAACTATACTTGAATAGGG-GGAGCCA 269
Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 268 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGA 209
Query 672 GTATAGGG 679
||||||||
Sbjct 208 GTATAGGG 201
>seq27
Length=533
Score = 279 bits (308), Expect = 2e-72
Identities = 181/195 (93%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 303 TGTAAAGCTCCTTCG-CGAGTCGAGA-GTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 360
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TTCTTCAAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 420
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTT-GAAAGGGAAGCGCT 201
|||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||
Sbjct 421 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGGAAAGGGAAGCGCT 480
Query 202 TGCAACCAGACTTGC 216
|| |||||||||||
Sbjct 481 TGTGACCAGACTTGC 495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079836508100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |