Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28] 7,622 sequences; 36,716,275 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq53 125 2e-26 >seq53 Length=10205 Score = 125 bits (138), Expect = 2e-26 Identities = 200/283 (71%), Gaps = 17/283 (6%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||||| | |||||||| Sbjct 3259 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 3318 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||| Sbjct 3319 ATCGTTACGTCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 3378 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC------TTCGC--GT 178 || | | |||| ||||||| || ||||||| ||| || | | | ||| | | Sbjct 3379 CCCTCA-CGTTAAGGCCGCCATTAACCGGGGGTTCCTTCTACACCAAACCTTTCACAATT 3437 Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||| || || | ||| |||||| ||||||| |||||| |||||| | | Sbjct 3438 TAGTTATTTCC-----GTTACCAGCCGGCATCGGGCAGAGATCACACTCTATACTTAGAT 3492 Query 239 TT-TCGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || || | ||| ||| |||||| |||||| | |||||||||| Sbjct 3493 TTATCATTTTTACGCAAAGTGCTTTGTTTTAATTAAACAGTCG 3535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260703901824