Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28]
7,622 sequences; 36,716,275 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2003 194 3e-47
seq24 136 6e-30
seq7243 73.4 6e-11
>seq2003
Length=336
Score = 194 bits (214), Expect = 3e-47
Identities = 146/166 (88%), Gaps = 7/166 (4%)
Strand=Plus/Minus
Query 94 AGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTAGCAG 152
|||| ||||||||||||| || || | | ||| || || | ||||||||||||||
Sbjct 336 AGCCGATAGTCCCTCTAAAAA-CCGGGGGCG--CCAAAG--GACGCGGGCTATTTAGCAG 282
Query 153 GTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGG 212
||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 281 GTTAAGG-CTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGG 223
Query 213 CCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 222 CCATGCACCACCACCCATAAAATCAAGAAAGAGCTCTCAATCTGTC 177
>seq24
Length=505
Score = 136 bits (150), Expect = 6e-30
Identities = 99/110 (90%), Gaps = 5/110 (5%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 401 ACTCGCTGGCTGTGT--GTGTAGC-CGCGTGCGGCCCAGAACATCTAAGGGCATCACAG- 456
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111
|||||||||||||||||||||||| |||| | |||| |||||||||||||
Sbjct 457 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAA 505
>seq7243
Length=383
Score = 73.4 bits (80), Expect = 6e-11
Identities = 62/75 (83%), Gaps = 6/75 (8%)
Strand=Plus/Plus
Query 166 TCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAACTAAGAACGGCCATGCA 219
||||||||| ||||| |||||||| ||||| || | |||||||||||||||||||
Sbjct 1 TCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAACTAAGAACGGCCATGCA 60
Query 220 CCACCACCCATAGAA 234
||||| |||||| ||
Sbjct 61 CCACCGCCCATAAAA 75
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796741165782
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |