Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28]
7,622 sequences; 36,716,275 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq72 713 0.0
>seq72
Length=1004
Score = 713 bits (790), Expect = 0.0
Identities = 486/537 (91%), Gaps = 11/537 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 861 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 802
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 801 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 742
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||| |||| |||||| ||| || || |||| |||||| || ||
Sbjct 741 CGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACGT--AAATCCAGCCCCGCTTAATCGA 684
Query 187 TTAAGTaaaaaaaCGATAAGGGTAG-TGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
||||||||||||| ||| | |||| ||||||||||| |||||||| |||||||| |
Sbjct 683 ATAAGTAAAAAAACAATAGGAGTAGGTGGTATTTCACCGGCGCCGAA---GCTCCCACCT 627
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|||||||||||| | | || |||||||| ||| ||||||||||||||||||||||||||
Sbjct 626 ATTCTACACCTC-CTATTCTTTTCACAATGTCA-ACTAGAGTCAAGCTCAACAGGGTCTT 569
Query 306 CTTTCCCCGCTGATTCCGCCAAG-CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
|||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||
Sbjct 568 CTTTCCCCGCTGATTCTGCCAAGGCCCGTTCCCT-GGCTGTGGTTTCGCTAGATAGTAGA 510
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 450
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 449 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC-TTTACCCGCGCTTGGTCAAATTA 391
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
||| || ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 390 CTTTGCTGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635075365056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |