Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28] 7,622 sequences; 36,716,275 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq981 174 3e-41 >seq981 Length=731 Score = 174 bits (192), Expect = 3e-41 Identities = 215/279 (77%), Gaps = 15/279 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| ||||||| |||||||||||||||| |||| ||| |||||| Sbjct 520 GTACGAGAGGAACCGTT--ATTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 464 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||| |||||||||||||| |||| | ||| || |||||||||||| ||| || ||||| Sbjct 463 GCCC--AAGCTACCATCTGCAGGATAACGGCGGA-CGCCTCTAAGTCGGAACCC-TGCCA 408 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | || | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 407 GAACGCGCC-ATAC-CTCCCGCACGTT-TAGACGGATAAGAATAGGCTTCGGCCTCGTAT 351 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 || |||||| || ||| | || || ||||||| || | | | | ||| |||| Sbjct 350 CTCAGCAGG-CGATAAC--CCCGCCGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATTGT 295 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| || |||| ||| |||||||||||||||||| Sbjct 294 AATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819139511808