Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28]
7,622 sequences; 36,716,275 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq981 174 3e-41
>seq981
Length=731
Score = 174 bits (192), Expect = 3e-41
Identities = 215/279 (77%), Gaps = 15/279 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| ||||||| |||||||||||||||| |||| ||| ||||||
Sbjct 520 GTACGAGAGGAACCGTT--ATTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 464
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||| |||||||||||||| |||| | ||| || |||||||||||| ||| || |||||
Sbjct 463 GCCC--AAGCTACCATCTGCAGGATAACGGCGGA-CGCCTCTAAGTCGGAACCC-TGCCA 408
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | || | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 407 GAACGCGCC-ATAC-CTCCCGCACGTT-TAGACGGATAAGAATAGGCTTCGGCCTCGTAT 351
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| |||||| || ||| | || || ||||||| || | | | | ||| ||||
Sbjct 350 CTCAGCAGG-CGATAAC--CCCGCCGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATTGT 295
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| ||||||||||||||||||
Sbjct 294 AATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819139511808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |