Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734235.1_202014-07-28]
7,622 sequences; 36,716,275 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq20 444 2e-122
seq19 159 1e-36
>seq20
Length=543
Score = 444 bits (492), Expect = 2e-122
Identities = 286/306 (93%), Gaps = 6/306 (2%)
Strand=Plus/Minus
Query 200 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT 259
|||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct 516 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCGTGCA--TCGAG 459
Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319
||||||| ||||||||||| ||||||||| |||| ||||||||| |||||||||||||
Sbjct 458 AAGTTATCATGAATCACCAGTGAGCCCCGA-GGGCATTGGTTTTTAATCTAATAAATACT 400
Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 340
Query 380 GT-AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 339 GTAATTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCGC- 281
Query 439 GTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTAC 498
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 280 GTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTAAGACAAGCATATGACTAC 222
Query 499 TGGCAG 504
||||||
Sbjct 221 TGGCAG 216
>seq19
Length=360
Score = 159 bits (176), Expect = 1e-36
Identities = 135/161 (84%), Gaps = 5/161 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 205 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 264
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||||| ||||||||| ||||||| |||||||||| |||| ||| ||||||
Sbjct 265 CGCCGTGTCGGCATTGGGTAA-TTGCGCG-CTGCTGCCTT-CTTGATTGTAAACGCCGTT 321
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161
||||| ||||||| |||| |||||| | |||||
Sbjct 322 --CCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTT 360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510284877312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |