Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734245.1_202014-07-28]
6,159 sequences; 36,863,900 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq38 372 6e-101
seq16 102 2e-19
seq4925 82.4 1e-13
>seq38
Length=461
Score = 372 bits (412), Expect = 6e-101
Identities = 232/248 (94%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 81 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 402
Query 141 ATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGG 200
|||||||||||||||||||||||||||||||| ||||| ||||| | || ||||||||
Sbjct 401 ATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGA 344
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 343 GAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 284
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||
Sbjct 283 TCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGC 224
Query 321 CCTTTGTA 328
||||||||
Sbjct 223 CCTTTGTA 216
>seq16
Length=345
Score = 102 bits (112), Expect = 2e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 74 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 15
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 14 AGGGACTATCGGCT 1
>seq4925
Length=11804
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 4931 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 4874
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 4873 TGTGTCGTGCTGGG 4860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947141661952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |