Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734265.1_202014-07-28] 8,518 sequences; 35,871,377 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq15 334 3e-89 seq16 277 7e-72 >seq15 Length=963 Score = 334 bits (370), Expect = 3e-89 Identities = 268/315 (85%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 628 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 687 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 688 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 747 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 | ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 748 -GGAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 806 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||||||| | | | | ||| || || ||| || ||||||||| | | | Sbjct 807 GTGACCAGACTTGCGC-CGGGGGATCATCCAGCGTTCTC-GCTGGTGCACTCCCCCG-GT 863 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 ||||||||||||| | | || | ||| |||||| |||| | |||| || |||||| Sbjct 864 TCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAGGCTTCGGG-ACCTGGCTCCTTTCGGG 922 Query 322 GGGTGTTATAGCCCG 336 | ||||||||||||| Sbjct 923 GAGTGTTATAGCCCG 937 >seq16 Length=499 Score = 277 bits (306), Expect = 7e-72 Identities = 203/233 (87%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 452 GTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT 511 |||||||||| ||||||| ||||||||||||||||||| ||||| || | || Sbjct 499 GTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGTAGGTGAGAGCTTC----GGC 444 Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTT-GAGTAAGAGCATAGCTGTTGGG 570 ||| ||||||||||||||||||| |||||| |||||| ||||| |||||| | | || Sbjct 443 GCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTTGAGTAGGAGCATTAACGCTTGG 384 Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct 383 ACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCT-GTGGAGG 325 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 324 CTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079817288900