Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734265.1_202014-07-28]
8,518 sequences; 35,871,377 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq26 358 1e-96
seq31 95.1 2e-17
seq5150 84.2 4e-14
>seq26
Length=496
Score = 358 bits (396), Expect = 1e-96
Identities = 224/240 (93%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 89 CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTG 60
Query 149 GGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTG 208
|||||||||||||||||||||||| ||||| ||||| | || |||||||| ||| | |
Sbjct 61 GGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCG 118
Query 209 GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAAC 268
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 GGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAAC 178
Query 269 GAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 179 GAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 238
>seq31
Length=343
Score = 95.1 bits (104), Expect = 2e-17
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| | ||||||||||||
Sbjct 271 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGC-CCGGCTTCTTAG 329
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 330 AGGGACTATCGGCT 343
>seq5150
Length=15224
Score = 84.2 bits (92), Expect = 4e-14
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223
||||||||| ||||| ||||| | || |||||||| ||| | ||||||||||||||||
Sbjct 8368 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 8311
Query 224 CTCTGTCGTGCTGGG 238
|| ||||||||||||
Sbjct 8310 CTGTGTCGTGCTGGG 8296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947119317504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |