Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734265.1_202014-07-28]
8,518 sequences; 35,871,377 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq10 208 1e-51
>seq10
Length=2344
Score = 208 bits (230), Expect = 1e-51
Identities = 222/280 (79%), Gaps = 10/280 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGG-TTTTTGCGGCTGTCTGACCAGGCAG 59
|||||||||||||||| | |||||| ||||||| ||||||||| |||| ||| |||||
Sbjct 1189 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGGTTTTTGCGGTTGTCCGACAGGGCAG 1246
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
||||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||
Sbjct 1247 TGCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCC 1306
Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
|| ||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 1307 AG-ACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTA 1363
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238
|| |||||| || ||| || | || ||||||| || | | | | ||| ||||
Sbjct 1364 TCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATTG 1420
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| ||||||||||||||||||
Sbjct 1421 TAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819132401152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |